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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3058707_3059952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3058707 - 3059952

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCTTTTGATT

Flanking Amino Acid:

YATYGKQPDNSPEYSLFVGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.3

0.66

0.8

36.4

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

69.5

0.7

1.1

83.52

30.9

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867