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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3060085_3063197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3060085 - 3063197

Intron Length:

3113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CGTATCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTTGCTTGATA

Flanking Amino Acid:

KVVLDQAGVSKGYGFVKFTD

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

68.1

0.45

58.1

38.5

Major PPT

76.5

0.6

0.9

69.6

36.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

70.3

0.63

1.7

82.09

33.1

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002642

3052485 - 3067351

14867