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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3064888_3065462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3064888 - 3065462

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAG

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGTAT

U12 Branch Point Sequence:

GCTGTCCTAAGG

Flanking Amino Acid:

QYGYTQSTMQSYEEVGEDAL

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

62.5

43.8

Major BPS

0.03

1.4

51.8

43.6

Major PPT

89.7

0.89

0.7

84.7

30.1

Minor 5ss

29.9

-2.3

3.3

37.9

Minor BPS

-0.5

47.75

45.6

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867