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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3065497_3067214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3065497 - 3067214

Intron Length:

1718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

TAGCATGTGACC

Flanking Amino Acid:

YEEVGEDALEDPTPQLDVHE

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

63.3

0.33

1.5

41.2

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

-0.5

2.1

52.64

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867