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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3078387_3078762_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3078387 - 3078762

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CTCACCCCATTT

Flanking Amino Acid:

FWDTAGQERFRSVTRSYYRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

67.6

39.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

52.7

0.06

48.4

28.5

Minor 5ss

27.7

-2.6

2.9

32.8

42.1

Minor BPS

41.7

-0.5

57.4

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029843

3076724 - 3080792

4069

ENSAPLT00000002678

3075407 - 3082656

7250