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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3079055_3080684_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3079055 - 3080684

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCATCTAC

5'SS Class:

weak_major

3'SS Sequence:

GGTCCCAGACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGAAAAA

U12 Branch Point Sequence:

CGGTCCCAGACA

Flanking Amino Acid:

VAQAFQMLTLATAKQLETQP

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.3

47.5

45.2

Major BPS

-0.3

1.1

45.4

33.7

Major PPT

46.9

-0.1

1.1

39.3

38.1

Minor 5ss

29.4

-2.4

3.9

38.6

Minor BPS

46.1

-0.3

55.62

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029843

3076724 - 3080792

4069