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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3080640_3081996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3080640 - 3081996

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

GGCTTCCCACGT

Flanking Amino Acid:

KACTTEAHKQRMALIRKTTK

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

0.88

0.6

84.2

23.7

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

36.9

-0.9

2.1

49.73

43.7

Associated Gene:

Gene:

TAF12

Ensembl Gene ID:

ENSAPLG00000002881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038727

3080160 - 3086630

6471

ENSAPLT00000002934

3080160 - 3085730

5571