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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3082086_3082499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3082086 - 3082499

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GTGTGCTGAGCG

Flanking Amino Acid:

LEVKDVQLHLERQWNMWIPG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

73.4

37.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

84.6

0.78

0.7

76.4

32.2

Minor 5ss

-1.9

3.2

43.8

Minor BPS

45.4

-0.4

2.1

53.1

47.1

Associated Gene:

Gene:

TAF12

Ensembl Gene ID:

ENSAPLG00000002881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038727

3080160 - 3086630

6471

ENSAPLT00000002934

3080160 - 3085730

5571