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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3084423_3085585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3084423 - 3085585

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TTTCTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTTTGCTAACC

Flanking Amino Acid:

VIKDVDTQIALIGSGPHNPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.88

0.6

81.6

30.5

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

-0

2.3

70.2

41.5

Associated Gene:

Gene:

TAF12

Ensembl Gene ID:

ENSAPLG00000002881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002934

3080160 - 3085730

5571