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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3087682_3088370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3087682 - 3088370

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

GTCCCCGTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

CTGTCCCCAGCT

Flanking Amino Acid:

LGDLSQPHSPEYAEPDLVQV

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

61.5

0.26

1.1

53.4

41.5

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

47.2

-0.1

2.1

69.05

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038968

3087230 - 3089991

2762

ENSAPLT00000035871

3086457 - 3089991

3535

ENSAPLT00000024242

3086457 - 3089991

3535