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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3088700_3088831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3088700 - 3088831

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

AGCCCCTCATCC

Flanking Amino Acid:

LLLAFLCRRRRKPAAELNCG

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

78.5

0.64

0.7

72.8

25.3

Minor 5ss

-2.3

3.1

41.6

Minor BPS

47.6

-0.2

1.8

55.67

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035871

3086457 - 3089991

3535