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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3088920_3089075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3088920 - 3089075

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CGGTGCTGATGC

Flanking Amino Acid:

PGVALDPEKADPTLLVLLLV

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

38.4

-0.9

2.2

43.29

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035871

3086457 - 3089991

3535