Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3091175_3091564_R

Intron Information:

Intron Rank:

138244

Intron Class:

major

Intron Phase:

Intron Coordinates:

3091175 - 3091564

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGGG

5'SS Class:

major

3'SS Sequence:

CCCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

AGCCCCTCACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

54.8

44.4

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

75.6

0.58

0.8

68.4

31.9

Minor 5ss

21.8

-3.3

3.4

28.2

Minor BPS

47.4

-0.2

1.8

55.51

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032240

3090178 - 3094034

3857