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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3110687_3114758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3110687 - 3114758

Intron Length:

4072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CTCGTCCTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.4

37.7

Major BPS

0.55

71.8

31.4

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

30.1

-2.3

2.6

34.2

41.4

Minor BPS

0.01

1.8

61.98

43.8

Associated Gene:

Gene:

YTHDF2

Ensembl Gene ID:

ENSAPLG00000020468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047308

3109952 - 3124596

14645