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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3116368_3126016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3116368 - 3126016

Intron Length:

9649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCCT

5'SS Class:

major

3'SS Sequence:

TTGCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

RQEEEENVKKERQGRVK*

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

44.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

88.4

0.86

0.7

84.2

30.7

Minor 5ss

38.9

-1.2

3.4

57.5

46.7

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

YTHDF2

Ensembl Gene ID:

ENSAPLG00000020468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027549

3112745 - 3126279

13535