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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3150286_3153819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3150286 - 3153819

Intron Length:

3534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGTTCCTTTGCT

Flanking Amino Acid:

CRGAVGALEESLDGDQAVLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

84.8

0.78

0.8

80.4

31.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

48.1

-0

3.6

85.16

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035011

3150160 - 3156466

6307