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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3153893_3154220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3153893 - 3154220

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCGG

5'SS Class:

major

3'SS Sequence:

CCCCCCCGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CCGTCCCCACCT

Flanking Amino Acid:

YVKAIHVSGLTHVDNEEQYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

57.7

Major BPS

63.6

0.34

65.3

32.1

Major PPT

62.6

0.28

0.9

56.4

27.2

Minor 5ss

35.8

-1.6

2.9

42.3

Minor BPS

44.2

-0.3

2.1

60.38

48.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035011

3150160 - 3156466

6307