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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3154367_3156079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3154367 - 3156079

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CTGCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CTGGGGTGACCC

Flanking Amino Acid:

REVTALFKNLVQNLNNIVSF

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.5

40.7

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

73.5

0.53

0.8

64.8

36.3

Minor 5ss

33.8

-1.8

40.2

39.7

Minor BPS

33.8

-1.2

2.4

41.89

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035011

3150160 - 3156466

6307