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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3170443_3170725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3170443 - 3170725

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

TGTGCCGTGACC

Flanking Amino Acid:

GYTMTIQLLQRPPLPRGGRR

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

48.6

-0

1.2

40.4

Major PPT

73.7

0.53

0.7

68.2

25.4

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

54.2

0.11

2.2

70.41

41.4

Associated Gene:

Gene:

TCEA3

Ensembl Gene ID:

ENSAPLG00000025037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026915

3168152 - 3174620

6469

ENSAPLT00000044949

3168152 - 3174620

6469

ENSAPLT00000041827

3168152 - 3174240

6089

ENSAPLT00000041574

3168152 - 3174620

6469

ENSAPLT00000038450

3168152 - 3174620

6469