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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3171397_3171508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3171397 - 3171508

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGGTC

5'SS Class:

major

3'SS Sequence:

GCTGCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TGGTCCCCAAAT

Flanking Amino Acid:

KKSSLDGKKERRDSADSRSS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

69.4

35.4

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

68.9

0.43

0.9

61.7

34.9

Minor 5ss

26.9

-2.6

3.8

39.6

46.7

Minor BPS

49.5

0.04

71.68

44.3

Associated Gene:

Gene:

TCEA3

Ensembl Gene ID:

ENSAPLG00000025037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044949

3168152 - 3174620

6469

ENSAPLT00000041827

3168152 - 3174240

6089

ENSAPLT00000041574

3168152 - 3174620

6469

ENSAPLT00000026915

3168152 - 3174620

6469