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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3172080_3172629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3172080 - 3172629

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAAC

5'SS Class:

major

3'SS Sequence:

CCTTGCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAC

U12 Branch Point Sequence:

CCCCCCCCACCT

Flanking Amino Acid:

EMLTAALRMDDDYKEFGVNC

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

70.2

35.9

Major BPS

49.1

-0

0.9

56.3

29.4

Major PPT

71.4

0.48

0.8

61.7

34.9

Minor 5ss

34.4

-1.8

2.9

39.8

40.4

Minor BPS

41.1

-0.6

53.97

47.1

Associated Gene:

Gene:

TCEA3

Ensembl Gene ID:

ENSAPLG00000025037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041574

3168152 - 3174620

6469

ENSAPLT00000038450

3168152 - 3174620

6469

ENSAPLT00000026915

3168152 - 3174620

6469

ENSAPLT00000044949

3168152 - 3174620

6469