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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3173237_3173604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3173237 - 3173604

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCAGG

5'SS Class:

major

3'SS Sequence:

CCCCCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

AGGCCCTGACGT

Flanking Amino Acid:

PGLIARMTAEEMASDELKEL

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.9

46.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

61.2

0.25

56.2

33.5

Minor 5ss

32.3

-2

39.8

45.8

Minor BPS

43.9

-0.3

57.6

44.6

Associated Gene:

Gene:

TCEA3

Ensembl Gene ID:

ENSAPLG00000025037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041574

3168152 - 3174620

6469

ENSAPLT00000038450

3168152 - 3174620

6469

ENSAPLT00000026915

3168152 - 3174620

6469

ENSAPLT00000044949

3168152 - 3174620

6469

ENSAPLT00000041827

3168152 - 3174240

6089