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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3173937_3174231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3173937 - 3174231

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTACG

5'SS Class:

major

3'SS Sequence:

TTCTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAC

U12 Branch Point Sequence:

GTGCCCCCACCC

Flanking Amino Acid:

LCNECGNRWKFC*

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

42.9

Major BPS

46.4

-0.2

1.2

52.1

34.1

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

37.6

-1.4

2.4

43.7

43.5

Minor BPS

42.9

-0.5

53.98

43.2

Associated Gene:

Gene:

TCEA3

Ensembl Gene ID:

ENSAPLG00000025037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041574

3168152 - 3174620

6469

ENSAPLT00000038450

3168152 - 3174620

6469

ENSAPLT00000026915

3168152 - 3174620

6469

ENSAPLT00000044949

3168152 - 3174620

6469

ENSAPLT00000041827

3168152 - 3174240

6089