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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3197811_3198456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3197811 - 3198456

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CCCTCTTTGACA

Flanking Amino Acid:

IMVMAVTKSKDGMVLCTLQF

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

80.2

34.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

77.9

0.63

0.7

72.8

25.4

Minor 5ss

22.3

-3.2

3.8

26.2

36.9

Minor BPS

65.8

0.49

1.3

65.36

41.9

Associated Gene:

Gene:

OPRD1

Ensembl Gene ID:

ENSAPLG00000002972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003017

3192446 - 3198989

6544