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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3209712_3210251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3209712 - 3210251

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GCTCGCTCACCT

Flanking Amino Acid:

LSSPVVKIVSGNDHLVMLTM

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

72.3

0.5

0.8

65.7

30.3

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

44.3

-0.3

2.2

62.32

47.2

Associated Gene:

Gene:

RCC1

Ensembl Gene ID:

ENSAPLG00000026840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036833

3206062 - 3216873

10812