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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3211339_3216806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3211339 - 3216806

Intron Length:

5468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTGTCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

CCCCCCCCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

82.5

0.73

0.9

36.6

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

46.1

-0.3

1.9

53.63

44.5

Associated Gene:

Gene:

RCC1

Ensembl Gene ID:

ENSAPLG00000026840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036833

3206062 - 3216873

10812