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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3222525_3223206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3222525 - 3223206

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGGA

5'SS Class:

major

3'SS Sequence:

CCTTTTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

AGATAAAGATCT

Flanking Amino Acid:

PWTKLTPADKAAIRKELNEF

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.2

57.2

42.4

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

81.4

0.71

0.7

76.6

25.4

Minor 5ss

34.3

-1.8

3.5

47.9

47.5

Minor BPS

36.6

-0.9

53.18

40.4

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036137

3220593 - 3280246

59654

ENSAPLT00000021044

3222044 - 3280246

58203

ENSAPLT00000002571

3221759 - 3274739

52981

ENSAPLT00000039886

3220593 - 3241719

21127

ENSAPLT00000037398

3220593 - 3258553

37961