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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3224968_3225523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3224968 - 3225523

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACAA

5'SS Class:

major

3'SS Sequence:

TGCTTTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

GGCGCCTCATGT

Flanking Amino Acid:

IRNQIGSTLTRRLSQRPTAE

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

58.9

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

79.5

0.66

0.8

77.9

Minor 5ss

35.7

-1.6

3.3

47.8

47.6

Minor BPS

41.6

-0.5

2.1

53.38

47.4

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021044

3222044 - 3280246

58203

ENSAPLT00000002571

3221759 - 3274739

52981

ENSAPLT00000039886

3220593 - 3241719

21127

ENSAPLT00000037398

3220593 - 3258553

37961

ENSAPLT00000036137

3220593 - 3280246

59654