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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3225675_3226103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3225675 - 3226103

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

CCCCCAGTCACA

Flanking Amino Acid:

EDEEEDESHNSTLANKVKRK

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

58.4

46.1

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

36.6

-1.5

3.5

53.2

44.6

Minor BPS

37.9

-0.9

2.4

45.02

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037398

3220593 - 3258553

37961

ENSAPLT00000036137

3220593 - 3280246

59654

ENSAPLT00000021044

3222044 - 3280246

58203

ENSAPLT00000002571

3221759 - 3274739

52981

ENSAPLT00000039886

3220593 - 3241719

21127