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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3226328_3226973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3226328 - 3226973

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

AGCTTCTCGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGAGATGTAATA

Flanking Amino Acid:

SLPVTIEMLKVPDDEEEEEE

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

67.9

37.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

63.5

0.3

62.8

39.1

Minor 5ss

33.5

-1.9

2.7

39.1

38.9

Minor BPS

43.4

-0.5

2.1

53.35

39.4

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036137

3220593 - 3280246

59654

ENSAPLT00000021044

3222044 - 3280246

58203

ENSAPLT00000002571

3221759 - 3274739

52981

ENSAPLT00000039886

3220593 - 3241719

21127

ENSAPLT00000037398

3220593 - 3258553

37961