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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3230446_3230573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3230446 - 3230573

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCACCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GCCTCTGTAACG

Flanking Amino Acid:

VPAEEPKKRQGSSSSQPGPE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

62.2

0.3

1.2

38.7

Major PPT

77.3

0.61

0.9

69.9

36.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

49.5

-0.1

2.1

55.14

46.4

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036137

3220593 - 3280246

59654

ENSAPLT00000021044

3222044 - 3280246

58203

ENSAPLT00000002571

3221759 - 3274739

52981

ENSAPLT00000039886

3220593 - 3241719

21127

ENSAPLT00000037398

3220593 - 3258553

37961