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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3252808_3256639_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3252808 - 3256639

Intron Length:

3832

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTGGCTGC

5'SS Class:

weak_major

3'SS Sequence:

GCTTTGGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCGGAT

U12 Branch Point Sequence:

CTTTGGTTTAAG

Flanking Amino Acid:

MGGWGSSSLGWLERGRGEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.3

48.9

44.2

Major BPS

51.2

0.03

1.5

51.1

46.3

Major PPT

0.34

1.2

67.2

Minor 5ss

-2.4

38.6

41.9

Minor BPS

40.2

-0.9

2.7

52.1

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032871

3250267 - 3256666

6400