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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3256979_3258506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3256979 - 3258506

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

80.9

33.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.6

0.58

79.1

33.2

Minor 5ss

33.4

-1.9

2.8

44.7

42.7

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037398

3220593 - 3258553

37961