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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3258554_3279439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3258554 - 3279439

Intron Length:

20886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTCGT

5'SS Class:

major

3'SS Sequence:

CCTGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTGTCTCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.5

43.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.9

0.79

0.8

79.6

32.3

Minor 5ss

31.8

-2.1

37.8

40.8

Minor BPS

66.1

0.58

1.6

83.48

38.1

Associated Gene:

Gene:

PHACTR4

Ensembl Gene ID:

ENSAPLG00000019553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036137

3220593 - 3280246

59654

ENSAPLT00000021044

3222044 - 3280246

58203