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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3316469_3320585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3316469 - 3320585

Intron Length:

4117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGATCA

5'SS Class:

major

3'SS Sequence:

TTCTTTGCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTGTGATGAGA

Flanking Amino Acid:

CPVSQGTDILNFSPDLALDS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

0.9

70.2

29.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.1

0.79

0.8

80.6

31.4

Minor 5ss

34.5

-1.8

39.8

Minor BPS

37.8

-0.9

2.4

50.98

40.8

Associated Gene:

Gene:

FAM76A

Ensembl Gene ID:

ENSAPLG00000004037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039412

3312249 - 3324825

12577