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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3340011_3340145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3340011 - 3340145

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CCGTTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

GCTGTCCCAATG

Flanking Amino Acid:

SNGVYYEPKCANKPGELDHA

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

46.2

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

69.2

0.43

65.1

36.3

Minor 5ss

28.7

-2.4

2.8

33.1

41.8

Minor BPS

42.3

-0.7

1.9

44.24

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036543

3339597 - 3345458

5862

ENSAPLT00000030245

3339597 - 3345458

5862