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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3341774_3341867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3341774 - 3341867

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

TCGCCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

GTGTCCTCAGCG

Flanking Amino Acid:

HRQHVFVHNMRFVHSKNRAA

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

66.8

0.38

0.9

57.3

38.6

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

-0

1.9

60.77

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021056

3335031 - 3345458

10428

ENSAPLT00000036543

3339597 - 3345458

5862

ENSAPLT00000017234

3335031 - 3345458

10428

ENSAPLT00000031481

3335031 - 3345458

10428

ENSAPLT00000030245

3339597 - 3345458

5862

ENSAPLT00000021945

3335031 - 3345458

10428