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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3342389_3342825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3342389 - 3342825

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAAAAC

U12 Branch Point Sequence:

CACCCCAAAAAC

Flanking Amino Acid:

SVFPSLEGFKFLREEYYQGR

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

46.3

-0.2

29.8

Major PPT

68.2

0.41

0.9

58.4

38.4

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

42.1

-0.6

1.9

47.22

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017234

3335031 - 3345458

10428

ENSAPLT00000030245

3339597 - 3345458

5862

ENSAPLT00000026834

3335031 - 3345458

10428

ENSAPLT00000021945

3335031 - 3345458

10428

ENSAPLT00000036543

3339597 - 3345458

5862

ENSAPLT00000021056

3335031 - 3345458

10428

ENSAPLT00000031481

3335031 - 3345458

10428