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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3342999_3343111_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3342999 - 3343111

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

CTGGGTGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CGTGCCTCAGTT

Flanking Amino Acid:

GNKSRIQYYGGQVITYQLAG

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

54.5

49.7

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

55.9

0.13

1.1

49.1

43.8

Minor 5ss

36.9

-1.5

3.1

39.5

46.2

Minor BPS

47.9

-0

1.9

64.73

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021945

3335031 - 3345458

10428

ENSAPLT00000021056

3335031 - 3345458

10428

ENSAPLT00000036543

3339597 - 3345458

5862

ENSAPLT00000017234

3335031 - 3345458

10428

ENSAPLT00000031481

3335031 - 3345458

10428

ENSAPLT00000026834

3335031 - 3345458

10428