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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3344299_3344681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3344299 - 3344681

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

CACCACATGATG

Flanking Amino Acid:

GAGGGSAPVPRGGPRLGLKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.9

75.3

40.8

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

77.5

0.62

0.7

69.2

31.4

Minor 5ss

30.1

-2.3

4.1

48.2

47.9

Minor BPS

41.2

-0.8

1.7

38.66

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021056

3335031 - 3345458

10428

ENSAPLT00000017234

3335031 - 3345458

10428