Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3450428_3450903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3450428 - 3450903

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTCTTCCCAACA

Flanking Amino Acid:

RSDLLSAIRQGFQLRKVEEQ

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

78.2

0.63

0.8

74.2

29.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

55.6

0.17

1.9

71.95

40.1

Associated Gene:

Gene:

WASF2

Ensembl Gene ID:

ENSAPLG00000010236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010683

3439154 - 3451061

11908