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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3482072_3482165_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3482072 - 3482165

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

AACCCCCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CGTTCCCCAACC

Flanking Amino Acid:

AIKEIPERDSRFSQPLHEEI

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

52.4

0.05

1.1

46.8

35.6

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

54.9

0.13

68.63

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016475

3481629 - 3485012

3384