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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3486598_3487702_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3486598 - 3487702

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

CTGGGCACCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGCAC

U12 Branch Point Sequence:

GTCTGGGCACCC

Flanking Amino Acid:

LAEAKKQRSDPVGVVKGGGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

59.7

41.3

Major BPS

-0.3

1.5

48.8

46.3

Major PPT

58.6

0.19

47.5

40.4

Minor 5ss

28.5

-2.5

3.1

35.6

41.4

Minor BPS

29.8

-1.5

2.7

42.35

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020848

3486408 - 3488051

1644