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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3511831_3511969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3511831 - 3511969

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TCTTGCTGAGTT

Flanking Amino Acid:

VVRLWNPRPESETLNGRVVV

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

49.2

0.02

2.1

72.5

44.8

Associated Gene:

Gene:

WDTC1

Ensembl Gene ID:

ENSAPLG00000015930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039151

3511633 - 3541687

30055

ENSAPLT00000016647

3511245 - 3528427

17183