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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3512163_3512577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3512163 - 3512577

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCACCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GCTCCTTTCACC

Flanking Amino Acid:

TDIKEANFFGSNAQYIVSGS

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

77.7

0.69

30.2

Major PPT

70.6

0.46

0.8

62.8

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

55.8

0.16

1.8

64.16

41.6

Associated Gene:

Gene:

WDTC1

Ensembl Gene ID:

ENSAPLG00000015930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039151

3511633 - 3541687

30055

ENSAPLT00000016647

3511245 - 3528427

17183