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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3517856_3519660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3517856 - 3519660

Intron Length:

1805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTAACCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTTTCTAACC

Flanking Amino Acid:

LLPKKCHTSGEVQNGKTSTN

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.5

0.64

0.8

74.7

34.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

70.1

0.61

1.6

82.44

30.9

Associated Gene:

Gene:

WDTC1

Ensembl Gene ID:

ENSAPLG00000015930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016647

3511245 - 3528427

17183

ENSAPLT00000039151

3511633 - 3541687

30055