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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3519737_3520779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3519737 - 3520779

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTTCTTCATCT

Flanking Amino Acid:

ELLVNMGGEQVYLFDLTYKQ

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.4

0.66

0.8

76.7

31.5

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

59.9

0.39

1.8

79.81

42.6

Associated Gene:

Gene:

WDTC1

Ensembl Gene ID:

ENSAPLG00000015930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039151

3511633 - 3541687

30055

ENSAPLT00000016647

3511245 - 3528427

17183