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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3525154_3526012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3525154 - 3526012

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

GTTTGTGTAATA

Flanking Amino Acid:

RRLGLEAELQGHSGCVNCLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

87.4

0.84

0.8

88.2

29.1

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

48.5

-0.1

2.3

67.25

40.1

Associated Gene:

Gene:

WDTC1

Ensembl Gene ID:

ENSAPLG00000015930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039151

3511633 - 3541687

30055

ENSAPLT00000016647

3511245 - 3528427

17183