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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3545311_3565588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3545311 - 3565588

Intron Length:

20278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCGG

5'SS Class:

major

3'SS Sequence:

TCCTGCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAACAT

U12 Branch Point Sequence:

CTGCCCCCAACA

Flanking Amino Acid:

WILLACLMKLGFHVIPSVSN

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

54.5

49.7

Major BPS

48.4

-0.1

1.2

54.9

39.1

Major PPT

75.5

0.57

0.8

65.7

36.1

Minor 5ss

31.8

-2.1

3.1

42.4

Minor BPS

48.7

-0.1

1.9

62.08

43.7

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388