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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3568786_3569459_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3568786 - 3569459

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGGC

5'SS Class:

major

3'SS Sequence:

CCCCGGTCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTCGAT

U12 Branch Point Sequence:

TATTCGATGATT

Flanking Amino Acid:

TVIFFTVFVQGMTIRPLVDL

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

64.1

41.8

Major BPS

64.9

0.37

1.3

64.2

Major PPT

58.7

0.2

0.8

34.2

Minor 5ss

-2.5

3.2

35.5

41.1

Minor BPS

49.7

0.06

2.3

76.92

39.8

Associated Gene:

Gene:

SLC9A1

Ensembl Gene ID:

ENSAPLG00000016147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016880

3544977 - 3574364

29388